Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.89■□□□□ 0.13
RIPK2O43353 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.89■□□□□ 0.13
RIPK2O43353 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.89■□□□□ 0.13
RIPK2O43353 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RIPK2O43353 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.88■□□□□ 0.13
RIPK2O43353 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.88■□□□□ 0.13
RIPK2O43353 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.88■□□□□ 0.13
RIPK2O43353 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RIPK2O43353 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.88■□□□□ 0.13
RIPK2O43353 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.88■□□□□ 0.13
RIPK2O43353 AL691432.3-201ENST00000621860 400 ntBASIC15.88■□□□□ 0.13
RIPK2O43353 AC008267.7-201ENST00000624570 1194 ntBASIC15.88■□□□□ 0.13
RIPK2O43353 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.88■□□□□ 0.13
RIPK2O43353 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.88■□□□□ 0.13
RIPK2O43353 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.88■□□□□ 0.13
RIPK2O43353 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RIPK2O43353 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RIPK2O43353 FLJ16779-201ENST00000612722 7638 ntBASIC15.88■□□□□ 0.13
RIPK2O43353 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 AC136759.1-202ENST00000530858 2194 ntBASIC15.87■□□□□ 0.13
RIPK2O43353 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RIPK2O43353 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 AZGP1P1-201ENST00000411909 902 ntBASIC15.87■□□□□ 0.13
RIPK2O43353 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.87■□□□□ 0.13
RIPK2O43353 GHSR-202ENST00000427970 912 ntBASIC15.87■□□□□ 0.13
RIPK2O43353 AC074386.1-202ENST00000463561 864 ntBASIC15.87■□□□□ 0.13
RIPK2O43353 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.87■□□□□ 0.13
RIPK2O43353 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.87■□□□□ 0.13
RIPK2O43353 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.87■□□□□ 0.13
RIPK2O43353 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RIPK2O43353 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RIPK2O43353 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms