Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHD2O14647 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.07■□□□□ 0.96
CHD2O14647 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.07■□□□□ 0.96
CHD2O14647 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 AL357563.1-201ENST00000404728 395 ntBASIC21.06■□□□□ 0.96
CHD2O14647 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
CHD2O14647 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHD2O14647 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHD2O14647 MIR557-201ENST00000385239 98 ntBASIC21.06■□□□□ 0.96
CHD2O14647 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD2O14647 IDS-203ENST00000428056 1213 ntTSL 2 BASIC21.06■□□□□ 0.96
CHD2O14647 AC012441.2-201ENST00000444843 739 ntBASIC21.06■□□□□ 0.96
CHD2O14647 SCARNA21-201ENST00000517026 139 ntBASIC21.06■□□□□ 0.96
CHD2O14647 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.06■□□□□ 0.96
CHD2O14647 CYP4F23P-201ENST00000593402 1579 ntBASIC21.06■□□□□ 0.96
CHD2O14647 AGGF1P2-201ENST00000426656 2106 ntBASIC21.06■□□□□ 0.96
CHD2O14647 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 LINC01165-201ENST00000445190 1623 ntBASIC21.05■□□□□ 0.96
CHD2O14647 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD2O14647 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 AC020910.5-201ENST00000623668 1865 ntBASIC21.05■□□□□ 0.96
CHD2O14647 NCR3-202ENST00000376071 541 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD2O14647 HPGD-203ENST00000422112 805 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD2O14647 RN7SL81P-201ENST00000493781 261 ntBASIC21.05■□□□□ 0.96
CHD2O14647 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD2O14647 AC008723.1-201ENST00000506922 207 ntBASIC21.05■□□□□ 0.96
CHD2O14647 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.05■□□□□ 0.96
CHD2O14647 AC027237.1-201ENST00000560942 655 ntBASIC21.05■□□□□ 0.96
CHD2O14647 AC103810.10-201ENST00000606504 343 ntBASIC21.05■□□□□ 0.96
CHD2O14647 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC21.05■□□□□ 0.96
CHD2O14647 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.05■□□□□ 0.96
CHD2O14647 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 AC136759.1-202ENST00000530858 2194 ntBASIC21.05■□□□□ 0.96
CHD2O14647 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.05■□□□□ 0.96
CHD2O14647 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHD2O14647 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHD2O14647 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHD2O14647 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD2O14647 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD2O14647 AL627422.1-201ENST00000434104 580 ntBASIC21.04■□□□□ 0.96
CHD2O14647 AL645933.1-201ENST00000440087 609 ntBASIC21.04■□□□□ 0.96
CHD2O14647 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 PFN2-206ENST00000461930 606 ntTSL 4 BASIC21.04■□□□□ 0.96
CHD2O14647 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD2O14647 AL161773.1-201ENST00000624845 863 ntBASIC21.04■□□□□ 0.96
CHD2O14647 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD2O14647 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 AC127383.1-201ENST00000444697 1800 ntBASIC21.04■□□□□ 0.96
CHD2O14647 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD2O14647 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CHD2O14647 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD2O14647 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD2O14647 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 AC015909.3-201ENST00000572855 1794 ntBASIC21.04■□□□□ 0.96
CHD2O14647 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD2O14647 RPL8P2-201ENST00000430538 502 ntBASIC21.04■□□□□ 0.96
CHD2O14647 CHCHD2P9-201ENST00000461726 456 ntBASIC21.04■□□□□ 0.96
CHD2O14647 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD2O14647 AC006122.1-201ENST00000493323 440 ntBASIC21.04■□□□□ 0.96
CHD2O14647 AC010234.1-201ENST00000494599 870 ntBASIC21.04■□□□□ 0.96
CHD2O14647 MRPL22P1-201ENST00000505398 616 ntBASIC21.04■□□□□ 0.96
CHD2O14647 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD2O14647 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD2O14647 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms