Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
PITPNM1O00562 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PITPNM1O00562 RPS20P22-202ENST00000488192 1318 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 UBALD1-205ENST00000590891 2641 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 AL607033.1-201ENST00000623900 1599 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 MTND2P18-201ENST00000419962 1030 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 MED6P1-201ENST00000439659 713 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 AL139824.2-201ENST00000458731 1095 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.21■□□□□ 0.35
PITPNM1O00562 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.21■□□□□ 0.35
PITPNM1O00562 AC074051.4-201ENST00000564888 892 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 AC107373.2-201ENST00000607735 490 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 AC044839.1-208ENST00000634902 917 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 AC006927.3-201ENST00000638789 384 ntBASIC17.21■□□□□ 0.35
PITPNM1O00562 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.21■□□□□ 0.35
PITPNM1O00562 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
PITPNM1O00562 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PITPNM1O00562 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PITPNM1O00562 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PITPNM1O00562 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.21■□□□□ 0.34
PITPNM1O00562 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.21■□□□□ 0.34
PITPNM1O00562 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PITPNM1O00562 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PITPNM1O00562 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.21■□□□□ 0.34
PITPNM1O00562 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PITPNM1O00562 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PITPNM1O00562 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.2■□□□□ 0.34
PITPNM1O00562 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PITPNM1O00562 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.2■□□□□ 0.34
PITPNM1O00562 AK3P5-201ENST00000432033 519 ntBASIC17.2■□□□□ 0.34
PITPNM1O00562 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 Z83846.1-201ENST00000446798 265 ntBASIC17.2■□□□□ 0.34
PITPNM1O00562 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PITPNM1O00562 ELOC-208ENST00000523815 719 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC17.2■□□□□ 0.34
PITPNM1O00562 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 AC015910.1-201ENST00000579400 975 ntBASIC17.2■□□□□ 0.34
PITPNM1O00562 AC006116.5-201ENST00000591936 559 ntBASIC17.2■□□□□ 0.34
PITPNM1O00562 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.2■□□□□ 0.34
PITPNM1O00562 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 AP003497.2-201ENST00000624220 967 ntBASIC17.2■□□□□ 0.34
PITPNM1O00562 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC17.2■□□□□ 0.34
PITPNM1O00562 MTND2P41-201ENST00000637599 773 ntBASIC17.2■□□□□ 0.34
PITPNM1O00562 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms