Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.81■□□□□ 0.12
AP3B1O00203 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.81■□□□□ 0.12
AP3B1O00203 AC025678.2-201ENST00000562061 970 ntBASIC15.81■□□□□ 0.12
AP3B1O00203 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.81■□□□□ 0.12
AP3B1O00203 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 LINC01101-201ENST00000622953 1884 ntBASIC15.81■□□□□ 0.12
AP3B1O00203 AC023024.2-201ENST00000623561 1993 ntBASIC15.81■□□□□ 0.12
AP3B1O00203 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 AC134684.3-201ENST00000641758 218 ntBASIC15.81■□□□□ 0.12
AP3B1O00203 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AP3B1O00203 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.81■□□□□ 0.12
AP3B1O00203 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.8■□□□□ 0.12
AP3B1O00203 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
AP3B1O00203 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.8■□□□□ 0.12
AP3B1O00203 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.8■□□□□ 0.12
AP3B1O00203 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.8■□□□□ 0.12
AP3B1O00203 AC015922.1-201ENST00000421102 1152 ntBASIC15.8■□□□□ 0.12
AP3B1O00203 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 AC025048.3-201ENST00000590609 569 ntBASIC15.8■□□□□ 0.12
AP3B1O00203 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 AC005702.4-201ENST00000618393 416 ntBASIC15.8■□□□□ 0.12
AP3B1O00203 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.8■□□□□ 0.12
AP3B1O00203 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.8■□□□□ 0.12
AP3B1O00203 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
AP3B1O00203 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.8■□□□□ 0.12
AP3B1O00203 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AP3B1O00203 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
AP3B1O00203 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AP3B1O00203 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AP3B1O00203 AC015911.4-201ENST00000588022 1070 ntBASIC15.79■□□□□ 0.12
AP3B1O00203 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.79■□□□□ 0.12
AP3B1O00203 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms