Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCCD1A6NED2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RCCD1A6NED2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 BX640514.1-201ENST00000583223 1918 ntBASIC16.61■□□□□ 0.25
RCCD1A6NED2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 AC074338.1-201ENST00000416825 156 ntBASIC16.61■□□□□ 0.25
RCCD1A6NED2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 BX640515.1-201ENST00000617215 977 ntBASIC16.61■□□□□ 0.25
RCCD1A6NED2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RCCD1A6NED2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RCCD1A6NED2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 AP001267.2-201ENST00000532619 2086 ntBASIC16.6■□□□□ 0.25
RCCD1A6NED2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RCCD1A6NED2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 GHSR-202ENST00000427970 912 ntBASIC16.6■□□□□ 0.25
RCCD1A6NED2 AL592309.1-201ENST00000443127 649 ntBASIC16.6■□□□□ 0.25
RCCD1A6NED2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 AC105021.1-202ENST00000570572 669 ntBASIC16.6■□□□□ 0.25
RCCD1A6NED2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.6■□□□□ 0.25
RCCD1A6NED2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms