Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHISA3A0PJX4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 AC018442.1-201ENST00000421439 2061 ntBASIC13.62□□□□□ -0.23
SHISA3A0PJX4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 AC011467.4-201ENST00000594891 528 ntBASIC13.62□□□□□ -0.23
SHISA3A0PJX4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 AC063926.3-201ENST00000624734 5658 ntBASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SHISA3A0PJX4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 CICP20-201ENST00000443330 2801 ntBASIC13.61□□□□□ -0.23
SHISA3A0PJX4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 AC136604.1-201ENST00000418535 575 ntBASIC13.61□□□□□ -0.23
SHISA3A0PJX4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.61□□□□□ -0.23
SHISA3A0PJX4 AC092910.1-201ENST00000482027 1129 ntBASIC13.61□□□□□ -0.23
SHISA3A0PJX4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 FAM215A-202ENST00000632077 792 ntBASIC13.61□□□□□ -0.23
SHISA3A0PJX4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 AC067930.6-201ENST00000623257 4947 ntBASIC13.61□□□□□ -0.23
SHISA3A0PJX4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SHISA3A0PJX4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms