Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AC006335.1-201ENST00000445200 547 ntBASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RTN3P1-201ENST00000536295 711 ntBASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AL805961.1-201ENST00000642026 753 ntBASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AGGF1P2-201ENST00000426656 2106 ntBASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 AL157791.1-201ENST00000553667 1699 ntBASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTCH2Q9Y6C5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 PDIA3P2-201ENST00000428073 158 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 AC087045.2-201ENST00000606279 1003 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 MIR6756-201ENST00000616240 63 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 AP001065.2-201ENST00000617205 644 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 AC006453.1-201ENST00000636037 1257 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 PRSS30P-206ENST00000641773 873 ntBASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTCH2Q9Y6C5 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 AL353637.1-201ENST00000451571 732 ntBASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 RN7SL163P-201ENST00000583100 276 ntBASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTCH2Q9Y6C5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms