Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CLIC4Q9Y696 FO538757.1-201ENST00000623083 1397 ntBASIC17.83■□□□□ 0.45
CLIC4Q9Y696 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 ZBED1P1-201ENST00000502364 1930 ntBASIC17.83■□□□□ 0.44
CLIC4Q9Y696 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 KRT18P13-201ENST00000400056 1290 ntBASIC17.83■□□□□ 0.44
CLIC4Q9Y696 RPL13P2-201ENST00000440687 659 ntBASIC17.83■□□□□ 0.44
CLIC4Q9Y696 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLIC4Q9Y696 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 TUBB3P1-201ENST00000405796 1332 ntBASIC17.82■□□□□ 0.44
CLIC4Q9Y696 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 RPL5P21-201ENST00000404620 815 ntBASIC17.82■□□□□ 0.44
CLIC4Q9Y696 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 HLA-V-204ENST00000476601 1289 ntBASIC17.82■□□□□ 0.44
CLIC4Q9Y696 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 AC010336.2-201ENST00000564226 506 ntBASIC17.82■□□□□ 0.44
CLIC4Q9Y696 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.82■□□□□ 0.44
CLIC4Q9Y696 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLIC4Q9Y696 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.81■□□□□ 0.44
CLIC4Q9Y696 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 AC013726.1-201ENST00000563747 2285 ntBASIC17.81■□□□□ 0.44
CLIC4Q9Y696 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 SERBP1P3-201ENST00000459980 809 ntBASIC17.81■□□□□ 0.44
CLIC4Q9Y696 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.81■□□□□ 0.44
CLIC4Q9Y696 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms