Protein–RNA interactions for Protein: Q9Y679

AUP1, Ancient ubiquitous protein 1, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1Q9Y679 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 RNA5SP421-201ENST00000516864 134 ntBASIC13.65□□□□□ -0.22
AUP1Q9Y679 SLC25A39P2-201ENST00000537614 270 ntBASIC13.65□□□□□ -0.22
AUP1Q9Y679 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
AUP1Q9Y679 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AUP1Q9Y679 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC091951.1-201ENST00000512854 2465 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 GPS2P2-201ENST00000430745 888 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 KLF2P3-201ENST00000451977 1087 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC125807.1-201ENST00000483097 614 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 SPCS2P1-201ENST00000561636 679 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC026150.2-201ENST00000564693 1156 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 AP000842.3-202ENST00000569238 1080 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC084121.4-201ENST00000641598 221 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 AF228730.8-201ENST00000642140 221 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 AC069224.1-201ENST00000566372 1715 ntBASIC13.64□□□□□ -0.23
AUP1Q9Y679 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AUP1Q9Y679 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.64□□□□□ -0.23
AUP1Q9Y679 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.63□□□□□ -0.23
AUP1Q9Y679 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
AUP1Q9Y679 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AUP1Q9Y679 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AUP1Q9Y679 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms