Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDC42BPBQ9Y5S2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 SERF2-209ENST00000409646 559 ntTSL 4 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 CDC23-208ENST00000505120 455 ntTSL 3 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 AC012044.1-201ENST00000603431 297 ntBASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDC42BPBQ9Y5S2 LBH-202ENST00000401506 485 ntTSL 3 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AL355334.1-201ENST00000417713 215 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 IGLV3-15-201ENST00000518356 244 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 KRT18P36-201ENST00000411618 1276 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 RPL18P13-201ENST00000478088 569 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AC138894.2-201ENST00000602838 371 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 AL157813.1-201ENST00000612996 587 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 SUPT20HL2-201ENST00000486479 2409 ntBASIC22.96■■□□□ 1.27
CDC42BPBQ9Y5S2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CDC42BPBQ9Y5S2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC22.95■■□□□ 1.27
CDC42BPBQ9Y5S2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
CDC42BPBQ9Y5S2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 AC006335.1-201ENST00000445200 547 ntBASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 RN7SL736P-201ENST00000613111 269 ntBASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 AC006453.1-201ENST00000636037 1257 ntBASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 AC092127.1-201ENST00000567093 3455 ntBASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CDC42BPBQ9Y5S2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 ZBTB45P1-201ENST00000452761 1456 ntBASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CDC42BPBQ9Y5S2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms