Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC136604.1-201ENST00000418535 575 ntBASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 MTND6P24-201ENST00000440466 518 ntBASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC007967.4-201ENST00000614700 386 ntBASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF11Q9Y3C5 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 AC005912.2-201ENST00000619492 2400 ntBASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 SPDYE17-201ENST00000412399 783 ntBASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 MIR6080-201ENST00000617359 66 ntBASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF11Q9Y3C5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 AC091951.1-201ENST00000512854 2465 ntBASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF11Q9Y3C5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms