Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 AL022328.1-201ENST00000610050 478 ntBASIC16.15■□□□□ 0.18
SCML2Q9UQR0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCML2Q9UQR0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCML2Q9UQR0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SCML2Q9UQR0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 AC007787.1-201ENST00000588095 1583 ntBASIC16.14■□□□□ 0.17
SCML2Q9UQR0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 AL645937.2-201ENST00000396808 931 ntBASIC16.14■□□□□ 0.17
SCML2Q9UQR0 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.14■□□□□ 0.17
SCML2Q9UQR0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 KRT43P-201ENST00000434019 910 ntBASIC16.14■□□□□ 0.17
SCML2Q9UQR0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 AL512343.1-201ENST00000605837 169 ntBASIC16.14■□□□□ 0.17
SCML2Q9UQR0 PRSS30P-206ENST00000641773 873 ntBASIC16.14■□□□□ 0.17
SCML2Q9UQR0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
SCML2Q9UQR0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 AC104457.1-201ENST00000401024 814 ntBASIC16.13■□□□□ 0.17
SCML2Q9UQR0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 AL355864.2-201ENST00000447420 863 ntBASIC16.13■□□□□ 0.17
SCML2Q9UQR0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 SAMD11P1-201ENST00000571429 661 ntBASIC16.13■□□□□ 0.17
SCML2Q9UQR0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SCML2Q9UQR0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms