Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 AC007950.2-201ENST00000615045 2347 ntBASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PARPBPQ9NWS1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 PCDHA3-202ENST00000532566 4594 ntBASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC025048.3-201ENST00000590609 569 ntBASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC005702.4-201ENST00000618393 416 ntBASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PARPBPQ9NWS1 AC010491.1-201ENST00000563101 2797 ntBASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 AC044860.1-202ENST00000559481 777 ntBASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 SPCS2P1-201ENST00000561636 679 ntBASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PARPBPQ9NWS1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms