Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 AC124067.4-201ENST00000519691 2379 ntBASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 AC016629.1-201ENST00000596579 586 ntBASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRMT13Q9NUP7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 NUS1P3-201ENST00000423502 862 ntBASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 UPF3AP2-201ENST00000457924 1132 ntBASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 AC126915.1-201ENST00000522847 1038 ntBASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRMT13Q9NUP7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 AL139094.1-201ENST00000405549 1188 ntBASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.97■□□□□ 0.31
TRMT13Q9NUP7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.96■□□□□ 0.31
TRMT13Q9NUP7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRMT13Q9NUP7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRMT13Q9NUP7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.96■□□□□ 0.31
TRMT13Q9NUP7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRMT13Q9NUP7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.96■□□□□ 0.31
TRMT13Q9NUP7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms