Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PSEN1-202ENST00000357710 2776 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC036111.1-201ENST00000533973 1582 ntBASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC016397.2-201ENST00000624848 1985 ntBASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AL031731.1-201ENST00000642131 2094 ntBASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC138907.5-202ENST00000569484 235 ntBASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AD001527.2-201ENST00000622994 785 ntBASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CNOT4-203ENST00000361528 2215 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 AC080128.2-201ENST00000641520 11863 ntBASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
CDC42SE1Q9NRR8 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
CDC42SE1Q9NRR8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms