Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SND1-IT1Q9HBX3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 KRT18P27-201ENST00000427733 1299 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AC093724.1-201ENST00000448659 1027 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 KRT18P31-201ENST00000506277 1292 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 IGHV3-65-201ENST00000523210 341 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AP002469.2-201ENST00000531724 424 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AC005840.4-201ENST00000541242 2494 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 AC148477.4-201ENST00000613430 1793 ntBASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC10.54□□□□□ -0.72
SND1-IT1Q9HBX3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 AC073621.1-201ENST00000392730 636 ntBASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 NME2-201ENST00000393183 568 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 EHF-205ENST00000527935 557 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.53□□□□□ -0.72
SND1-IT1Q9HBX3 REXO1L6P-202ENST00000619970 1078 ntBASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms