Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AP001160.2-201ENST00000596071 487 ntBASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AL158211.3-201ENST00000607385 239 ntBASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 NORAD-201ENST00000565493 5339 ntBASIC14.95□□□□□ -0.02
BRF2Q9HAW0 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.95□□□□□ -0.02
BRF2Q9HAW0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
BRF2Q9HAW0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 GHSR-202ENST00000427970 912 ntBASIC14.94□□□□□ -0.02
BRF2Q9HAW0 KRT18P64-201ENST00000434946 1219 ntBASIC14.94□□□□□ -0.02
BRF2Q9HAW0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 KRT18P43-201ENST00000469825 1281 ntBASIC14.94□□□□□ -0.02
BRF2Q9HAW0 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 AC027369.6-201ENST00000525520 931 ntBASIC14.94□□□□□ -0.02
BRF2Q9HAW0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
BRF2Q9HAW0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
BRF2Q9HAW0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms