Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 AL138918.1-201ENST00000568306 659 ntBASIC15.03■□□□□ -0
PIF1Q9H611 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.03■□□□□ -0
PIF1Q9H611 AC120114.3-201ENST00000611923 658 ntBASIC15.03■□□□□ -0
PIF1Q9H611 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 AC004877.2-201ENST00000623941 599 ntBASIC15.03■□□□□ -0
PIF1Q9H611 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
PIF1Q9H611 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 LINC01101-201ENST00000622953 1884 ntBASIC15.03■□□□□ -0
PIF1Q9H611 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PIF1Q9H611 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PIF1Q9H611 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.03■□□□□ -0
PIF1Q9H611 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PIF1Q9H611 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.02■□□□□ -0
PIF1Q9H611 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.02■□□□□ -0
PIF1Q9H611 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.02■□□□□ -0
PIF1Q9H611 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.02■□□□□ -0
PIF1Q9H611 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 AC007292.2-201ENST00000593524 1812 ntBASIC15.02■□□□□ -0
PIF1Q9H611 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PIF1Q9H611 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PIF1Q9H611 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.02■□□□□ -0
PIF1Q9H611 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.02■□□□□ -0
PIF1Q9H611 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.02■□□□□ -0
PIF1Q9H611 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.02■□□□□ -0
PIF1Q9H611 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.02■□□□□ -0
PIF1Q9H611 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.02■□□□□ -0
PIF1Q9H611 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.02■□□□□ -0
PIF1Q9H611 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.02■□□□□ -0
PIF1Q9H611 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PIF1Q9H611 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.02■□□□□ -0
PIF1Q9H611 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PIF1Q9H611 AC027601.4-201ENST00000611259 610 ntBASIC15.02■□□□□ -0
PIF1Q9H611 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.02□□□□□ -0.01
PIF1Q9H611 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.02□□□□□ -0.01
PIF1Q9H611 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.02□□□□□ -0.01
PIF1Q9H611 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.02□□□□□ -0.01
PIF1Q9H611 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PIF1Q9H611 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PIF1Q9H611 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.02□□□□□ -0.01
PIF1Q9H611 INTS4P1-203ENST00000641008 3683 ntBASIC15.02□□□□□ -0.01
PIF1Q9H611 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PIF1Q9H611 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 AC013726.1-201ENST00000563747 2285 ntBASIC15.01□□□□□ -0.01
PIF1Q9H611 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 AL691432.1-201ENST00000596308 1422 ntBASIC15.01□□□□□ -0.01
PIF1Q9H611 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.01□□□□□ -0.01
PIF1Q9H611 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.01□□□□□ -0.01
PIF1Q9H611 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.01□□□□□ -0.01
PIF1Q9H611 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
PIF1Q9H611 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.01□□□□□ -0.01
PIF1Q9H611 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PIF1Q9H611 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PIF1Q9H611 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms