Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 MIR4469-201ENST00000583919 79 ntBASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 AC063926.3-201ENST00000624734 5658 ntBASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AMBRA1Q9C0C7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AC027307.2-201ENST00000591252 911 ntBASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AMBRA1Q9C0C7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 AL355306.1-201ENST00000415580 579 ntBASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 AC211486.1-202ENST00000416371 468 ntBASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 AC142381.1-201ENST00000426099 345 ntBASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 AC244107.1-201ENST00000442033 332 ntBASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.66□□□□□ -0.06
AMBRA1Q9C0C7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms