Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 BCAR1-209ENST00000546196 1340 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 LINC01230-201ENST00000625222 3017 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC002056.1-201ENST00000395613 760 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 RARRES2P8-201ENST00000566335 367 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC068137.2-201ENST00000605408 478 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC099522.2-201ENST00000607001 744 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AC004877.2-201ENST00000623941 599 ntBASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GABARAPL3Q9BY60 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 AP001267.2-201ENST00000532619 2086 ntBASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 AZGP1P1-201ENST00000411909 902 ntBASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 AC026979.3-201ENST00000607315 403 ntBASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 AC018529.2-202ENST00000611482 3087 ntBASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GABARAPL3Q9BY60 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 INTS4P1-203ENST00000641008 3683 ntBASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 OR2I1P-210ENST00000642037 4691 ntBASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
GABARAPL3Q9BY60 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GABARAPL3Q9BY60 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms