Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.03■□□□□ -0
THUMPD3Q9BV44 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.03■□□□□ -0
THUMPD3Q9BV44 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
THUMPD3Q9BV44 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
THUMPD3Q9BV44 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.03■□□□□ -0
THUMPD3Q9BV44 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
THUMPD3Q9BV44 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 AC004987.2-201ENST00000395959 1148 ntBASIC15.02■□□□□ -0
THUMPD3Q9BV44 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 AL138918.1-201ENST00000568306 659 ntBASIC15.02■□□□□ -0
THUMPD3Q9BV44 AC099522.2-201ENST00000607001 744 ntBASIC15.02■□□□□ -0
THUMPD3Q9BV44 AC091812.2-201ENST00000619081 385 ntBASIC15.02■□□□□ -0
THUMPD3Q9BV44 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.02■□□□□ -0
THUMPD3Q9BV44 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 AC148477.4-201ENST00000613430 1793 ntBASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
THUMPD3Q9BV44 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AC007292.2-201ENST00000593524 1812 ntBASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 MCCD1P2-201ENST00000423228 335 ntBASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 FAM58CP-201ENST00000435741 640 ntBASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AC023908.3-201ENST00000564211 3047 ntBASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
THUMPD3Q9BV44 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms