Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 AC097359.3-201ENST00000603982 1210 ntBASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 AL096865.1-201ENST00000606796 927 ntBASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 AC007326.2-201ENST00000624224 7579 ntBASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
YIPF4Q9BSR8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
YIPF4Q9BSR8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 SPDYE7P-202ENST00000420373 878 ntBASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 BCRP1-201ENST00000444246 691 ntBASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 AL589739.1-201ENST00000607720 493 ntBASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 AL109954.1-202ENST00000564051 2148 ntBASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
YIPF4Q9BSR8 C18orf15-201ENST00000623680 2534 ntBASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 AL035456.1-201ENST00000456064 1369 ntBASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 CNN2P2-201ENST00000443536 909 ntBASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 CNN2P3-201ENST00000450201 906 ntBASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.76□□□□□ -0.05
YIPF4Q9BSR8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms