Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCL13Q99616 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL13Q99616 AC009090.5-201ENST00000624886 2285 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 AC105250.1-201ENST00000509378 2057 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCL13Q99616 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CCL13Q99616 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.11□□□□□ -0.31
CCL13Q99616 AC002472.2-201ENST00000442739 958 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.11□□□□□ -0.31
CCL13Q99616 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 TPRX2P-201ENST00000535362 881 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 AC092337.1-201ENST00000568699 1129 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 AC004790.1-201ENST00000612686 536 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.11□□□□□ -0.31
CCL13Q99616 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CCL13Q99616 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CCL13Q99616 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.11□□□□□ -0.31
CCL13Q99616 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 PCDHA3-202ENST00000532566 4594 ntBASIC13.11□□□□□ -0.31
CCL13Q99616 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCL13Q99616 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCL13Q99616 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.11□□□□□ -0.31
CCL13Q99616 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL13Q99616 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCL13Q99616 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL13Q99616 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL13Q99616 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CCL13Q99616 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL13Q99616 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL13Q99616 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.1□□□□□ -0.31
CCL13Q99616 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL13Q99616 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL13Q99616 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCL13Q99616 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
CCL13Q99616 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.1□□□□□ -0.31
CCL13Q99616 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.1□□□□□ -0.31
CCL13Q99616 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.1□□□□□ -0.31
CCL13Q99616 AC008761.3-201ENST00000624803 892 ntBASIC13.1□□□□□ -0.31
CCL13Q99616 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms