Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.18■□□□□ 0.18
CDK5RAP1Q96SZ6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 ACKR1-201ENST00000368121 1240 ntBASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 AC022188.1-201ENST00000620960 1664 ntBASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK5RAP1Q96SZ6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 KRT43P-201ENST00000434019 910 ntBASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 TDH-203ENST00000531764 1110 ntBASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 MIR5189-201ENST00000577370 114 ntBASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK5RAP1Q96SZ6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms