Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RPS2P28-201ENST00000314255 741 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 AC004987.2-201ENST00000395959 1148 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RPL5P21-201ENST00000404620 815 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 RPS2P1-201ENST00000434010 821 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 TPM4P1-201ENST00000436100 807 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 AC105339.3-201ENST00000560043 636 ntBASIC12.74□□□□□ -0.37
RAB40CQ96S21 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB40CQ96S21 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
RAB40CQ96S21 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CICP14-201ENST00000629111 2732 ntBASIC12.73□□□□□ -0.37
RAB40CQ96S21 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 AC079781.3-201ENST00000449110 356 ntBASIC12.73□□□□□ -0.37
RAB40CQ96S21 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 AL450472.2-201ENST00000603663 1156 ntBASIC12.73□□□□□ -0.37
RAB40CQ96S21 TP73-AS1-207ENST00000624167 988 ntBASIC12.73□□□□□ -0.37
RAB40CQ96S21 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB40CQ96S21 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB40CQ96S21 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms