Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HPS1Q92902 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
HPS1Q92902 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HPS1Q92902 PI4KAP1-204ENST00000612579 1703 ntBASIC14.46□□□□□ -0.1
HPS1Q92902 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
HPS1Q92902 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HPS1Q92902 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.46□□□□□ -0.1
HPS1Q92902 LINC01230-201ENST00000625222 3017 ntBASIC14.46□□□□□ -0.1
HPS1Q92902 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HPS1Q92902 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.46□□□□□ -0.1
HPS1Q92902 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HPS1Q92902 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HPS1Q92902 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HPS1Q92902 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.45□□□□□ -0.1
HPS1Q92902 PTCHD3P3-201ENST00000403073 906 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 PMS2P2-201ENST00000425039 1128 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 RPS8P6-201ENST00000426177 609 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 MKNK2P1-201ENST00000437526 628 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 KRT18P2-201ENST00000447938 1258 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 YBX1P5-201ENST00000509441 847 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 AL391001.1-201ENST00000602747 715 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 AL133445.2-201ENST00000611191 527 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 AC020658.6-201ENST00000623564 1870 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 C20orf181-201ENST00000623918 480 ntBASIC14.45□□□□□ -0.1
HPS1Q92902 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.45□□□□□ -0.1
HPS1Q92902 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HPS1Q92902 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.45□□□□□ -0.1
HPS1Q92902 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
HPS1Q92902 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 AC013726.1-201ENST00000563747 2285 ntBASIC14.44□□□□□ -0.1
HPS1Q92902 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HPS1Q92902 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
HPS1Q92902 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.44□□□□□ -0.1
HPS1Q92902 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HPS1Q92902 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
HPS1Q92902 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.44□□□□□ -0.1
HPS1Q92902 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.44□□□□□ -0.1
HPS1Q92902 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 AC009712.1-201ENST00000564938 316 ntBASIC14.44□□□□□ -0.1
HPS1Q92902 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.44□□□□□ -0.1
HPS1Q92902 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms