Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 CICP11-201ENST00000434745 2827 ntBASIC16.62■□□□□ 0.25
DDX1Q92499 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.62■□□□□ 0.25
DDX1Q92499 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.62■□□□□ 0.25
DDX1Q92499 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DDX1Q92499 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
DDX1Q92499 AC022144.1-201ENST00000602255 1580 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
DDX1Q92499 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
DDX1Q92499 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.61■□□□□ 0.25
DDX1Q92499 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.61■□□□□ 0.25
DDX1Q92499 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.61■□□□□ 0.25
DDX1Q92499 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.61■□□□□ 0.25
DDX1Q92499 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 AC114501.2-201ENST00000439631 535 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.61■□□□□ 0.25
DDX1Q92499 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.61■□□□□ 0.25
DDX1Q92499 AL162274.1-201ENST00000617191 1098 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 AGAP7P-201ENST00000582299 2062 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 AGAP14-201ENST00000624701 2060 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.61■□□□□ 0.25
DDX1Q92499 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.61■□□□□ 0.25
DDX1Q92499 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DDX1Q92499 AC138969.3-201ENST00000546612 1459 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 AC138932.2-201ENST00000548268 1459 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 AC126755.4-201ENST00000549796 1459 ntBASIC16.61■□□□□ 0.25
DDX1Q92499 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.6■□□□□ 0.25
DDX1Q92499 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 MRPS18AP1-201ENST00000414458 589 ntBASIC16.6■□□□□ 0.25
DDX1Q92499 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.6■□□□□ 0.25
DDX1Q92499 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.6■□□□□ 0.25
DDX1Q92499 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
DDX1Q92499 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.6■□□□□ 0.25
DDX1Q92499 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 AC004461.2-201ENST00000629517 803 ntBASIC16.6■□□□□ 0.25
DDX1Q92499 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.6■□□□□ 0.25
DDX1Q92499 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DDX1Q92499 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 AL121723.1-201ENST00000445194 1519 ntBASIC16.6■□□□□ 0.25
DDX1Q92499 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
DDX1Q92499 MROH4P-201ENST00000431302 1578 ntBASIC16.6■□□□□ 0.25
DDX1Q92499 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
DDX1Q92499 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DDX1Q92499 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms