Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 AC148477.4-201ENST00000613430 1793 ntBASIC15.08■□□□□ 0
CLHC1Q8NHS4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLHC1Q8NHS4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.08■□□□□ 0
CLHC1Q8NHS4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AC093520.2-201ENST00000561830 333 ntBASIC15.07■□□□□ 0
CLHC1Q8NHS4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AC005829.1-201ENST00000570002 483 ntBASIC15.07■□□□□ 0
CLHC1Q8NHS4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AC055717.3-201ENST00000622967 595 ntBASIC15.07■□□□□ 0
CLHC1Q8NHS4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 AGAP7P-201ENST00000582299 2062 ntBASIC15.07■□□□□ 0
CLHC1Q8NHS4 AGAP14-201ENST00000624701 2060 ntBASIC15.07■□□□□ 0
CLHC1Q8NHS4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.07■□□□□ 0
CLHC1Q8NHS4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLHC1Q8NHS4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC004461.1-201ENST00000412461 403 ntBASIC15.06■□□□□ 0
CLHC1Q8NHS4 AL353705.2-201ENST00000428243 662 ntBASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC105021.1-202ENST00000570572 669 ntBASIC15.06■□□□□ 0
CLHC1Q8NHS4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 AC003101.2-201ENST00000612557 442 ntBASIC15.06■□□□□ 0
CLHC1Q8NHS4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLHC1Q8NHS4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.06■□□□□ 0
CLHC1Q8NHS4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms