Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AC012362.1-201ENST00000434906 739 ntBASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 EIF5AP2-201ENST00000585668 1047 ntBASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AP001527.2-201ENST00000614441 631 ntBASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AC007718.1-201ENST00000621078 280 ntBASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.93□□□□□ -0.34
CCDC168Q8NDH2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 GHSR-202ENST00000427970 912 ntBASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 AC087045.2-201ENST00000606279 1003 ntBASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 AP001282.1-201ENST00000531301 1499 ntBASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.92□□□□□ -0.34
CCDC168Q8NDH2 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 AC006158.1-201ENST00000610661 249 ntBASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 AC138466.4-201ENST00000623965 852 ntBASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 AC134407.2-201ENST00000625089 1978 ntBASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.91□□□□□ -0.34
CCDC168Q8NDH2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms