Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NANOGP1Q8N7R0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NANOGP1Q8N7R0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NANOGP1Q8N7R0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NANOGP1Q8N7R0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NANOGP1Q8N7R0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NANOGP1Q8N7R0 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AL365209.1-201ENST00000624418 6473 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 EEF1DP4-201ENST00000446006 880 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AC108751.1-201ENST00000490852 363 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AC096734.2-201ENST00000562054 433 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 LINC01711-201ENST00000598340 967 ntBASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
NANOGP1Q8N7R0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.96□□□□□ -0.18
NANOGP1Q8N7R0 AC084364.1-201ENST00000551967 1556 ntBASIC13.96□□□□□ -0.18
NANOGP1Q8N7R0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NANOGP1Q8N7R0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NANOGP1Q8N7R0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 AL137784.3-201ENST00000623858 2288 ntBASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
NANOGP1Q8N7R0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
NANOGP1Q8N7R0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.94□□□□□ -0.18
NANOGP1Q8N7R0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.94□□□□□ -0.18
NANOGP1Q8N7R0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms