Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCN4BQ8IWT1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCN4BQ8IWT1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCN4BQ8IWT1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SCN4BQ8IWT1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 AC112492.5-201ENST00000421897 457 ntBASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 ATP5G2P4-201ENST00000442175 420 ntBASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 IGHV3-71-201ENST00000523324 359 ntBASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 RAB43P1-201ENST00000561790 589 ntBASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 AL008721.1-201ENST00000609964 604 ntBASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 AL162274.1-201ENST00000617191 1098 ntBASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCN4BQ8IWT1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 AC015936.2-201ENST00000593177 259 ntBASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 RPSAP52-203ENST00000622976 1023 ntBASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 AC008894.3-201ENST00000624324 3103 ntBASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCN4BQ8IWT1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SCN4BQ8IWT1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms