Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
RAB43Q86YS6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 DGCR5-201ENST00000399539 862 ntBASIC15.02■□□□□ -0
RAB43Q86YS6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.02■□□□□ -0
RAB43Q86YS6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.02■□□□□ -0
RAB43Q86YS6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
RAB43Q86YS6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.02■□□□□ -0
RAB43Q86YS6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
RAB43Q86YS6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.02■□□□□ -0
RAB43Q86YS6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
RAB43Q86YS6 AL359881.2-201ENST00000602973 570 ntBASIC15.02■□□□□ -0
RAB43Q86YS6 AC099568.2-201ENST00000609194 695 ntBASIC15.02■□□□□ -0
RAB43Q86YS6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.02■□□□□ -0
RAB43Q86YS6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.02□□□□□ -0.01
RAB43Q86YS6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RAB43Q86YS6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 CYP4F24P-201ENST00000586049 1580 ntBASIC15.02□□□□□ -0.01
RAB43Q86YS6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB43Q86YS6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAB43Q86YS6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.02□□□□□ -0.01
RAB43Q86YS6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.02□□□□□ -0.01
RAB43Q86YS6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAB43Q86YS6 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 AC022532.1-201ENST00000624563 1728 ntBASIC15.01□□□□□ -0.01
RAB43Q86YS6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 AC245100.5-201ENST00000452108 331 ntBASIC15.01□□□□□ -0.01
RAB43Q86YS6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 GPR53P-205ENST00000457298 1084 ntBASIC15.01□□□□□ -0.01
RAB43Q86YS6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 HLA-A-202ENST00000376806 1854 ntBASIC15.01□□□□□ -0.01
RAB43Q86YS6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 AL161772.1-201ENST00000610494 4412 ntBASIC15.01□□□□□ -0.01
RAB43Q86YS6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.01□□□□□ -0.01
RAB43Q86YS6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAB43Q86YS6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
RAB43Q86YS6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
RAB43Q86YS6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RAB43Q86YS6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms