Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 AC112693.3-201ENST00000624819 1983 ntBASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 AC236430.1-201ENST00000402231 743 ntBASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 ZNF890P-202ENST00000530367 1156 ntBASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 SRD5A3P1-201ENST00000603021 949 ntBASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB11FIP4Q86YS3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 SPDYE19P-201ENST00000338590 713 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC015922.1-201ENST00000421102 1152 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 RNA5SP421-201ENST00000516864 134 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC023310.3-201ENST00000557027 670 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC100756.1-201ENST00000562736 682 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC138749.3-201ENST00000567691 622 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC011467.4-201ENST00000594891 528 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC116165.1-201ENST00000611806 668 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AC126177.1-201ENST00000547829 2218 ntBASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB11FIP4Q86YS3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB11FIP4Q86YS3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11FIP4Q86YS3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11FIP4Q86YS3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RAB11FIP4Q86YS3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB11FIP4Q86YS3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB11FIP4Q86YS3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB11FIP4Q86YS3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms