Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC008677.1-201ENST00000519230 1561 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 AC090616.6-203ENST00000579186 1945 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 AGAP7P-201ENST00000582299 2062 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 AGAP14-201ENST00000624701 2060 ntBASIC14.54□□□□□ -0.08
TUBA1AQ71U36 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBA1AQ71U36 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 AL355306.1-201ENST00000415580 579 ntBASIC14.53□□□□□ -0.08
TUBA1AQ71U36 AC092474.2-201ENST00000424288 719 ntBASIC14.53□□□□□ -0.08
TUBA1AQ71U36 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 AC105250.1-201ENST00000509378 2057 ntBASIC14.53□□□□□ -0.08
TUBA1AQ71U36 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBA1AQ71U36 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 FGD5P1-202ENST00000614866 2498 ntBASIC14.52□□□□□ -0.08
TUBA1AQ71U36 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TUBA1AQ71U36 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 PMS2P4-201ENST00000412466 1052 ntBASIC14.52□□□□□ -0.09
TUBA1AQ71U36 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AC004967.1-201ENST00000453589 447 ntBASIC14.52□□□□□ -0.09
TUBA1AQ71U36 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AC109635.5-201ENST00000533593 962 ntBASIC14.52□□□□□ -0.09
TUBA1AQ71U36 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 RARRES2P8-201ENST00000566335 367 ntBASIC14.52□□□□□ -0.09
TUBA1AQ71U36 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AC006538.3-201ENST00000612495 578 ntBASIC14.52□□□□□ -0.09
TUBA1AQ71U36 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TUBA1AQ71U36 AC112693.3-201ENST00000624819 1983 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms