Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RN7SL258P-201ENST00000478664 300 ntBASIC18.08■□□□□ 0.48
USP50Q70EL3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.08■□□□□ 0.48
USP50Q70EL3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.08■□□□□ 0.48
USP50Q70EL3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.08■□□□□ 0.48
USP50Q70EL3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC18.08■□□□□ 0.48
USP50Q70EL3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.08■□□□□ 0.48
USP50Q70EL3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.08■□□□□ 0.48
USP50Q70EL3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.08■□□□□ 0.48
USP50Q70EL3 AC005357.2-202ENST00000590507 1060 ntBASIC18.08■□□□□ 0.48
USP50Q70EL3 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
USP50Q70EL3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP50Q70EL3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.07■□□□□ 0.48
USP50Q70EL3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
USP50Q70EL3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
USP50Q70EL3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 AC239868.1-201ENST00000369385 493 ntBASIC18.07■□□□□ 0.48
USP50Q70EL3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 MIR1227-201ENST00000408484 88 ntBASIC18.07■□□□□ 0.48
USP50Q70EL3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.07■□□□□ 0.48
USP50Q70EL3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.07■□□□□ 0.48
USP50Q70EL3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
USP50Q70EL3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 MIR4649-201ENST00000582839 64 ntBASIC18.07■□□□□ 0.48
USP50Q70EL3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.07■□□□□ 0.48
USP50Q70EL3 AC242376.2-201ENST00000619355 883 ntBASIC18.07■□□□□ 0.48
USP50Q70EL3 AC002472.3-201ENST00000640124 621 ntBASIC18.07■□□□□ 0.48
USP50Q70EL3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.07■□□□□ 0.48
USP50Q70EL3 AL645608.8-201ENST00000606034 2086 ntBASIC18.07■□□□□ 0.48
USP50Q70EL3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
USP50Q70EL3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 RN7SKP175-201ENST00000408472 289 ntBASIC18.06■□□□□ 0.48
USP50Q70EL3 AC010141.1-201ENST00000411585 623 ntBASIC18.06■□□□□ 0.48
USP50Q70EL3 VDAC1P1-201ENST00000439229 848 ntBASIC18.06■□□□□ 0.48
USP50Q70EL3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC18.06■□□□□ 0.48
USP50Q70EL3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 AC138894.2-201ENST00000602838 371 ntBASIC18.06■□□□□ 0.48
USP50Q70EL3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
USP50Q70EL3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 AC020916.1-201ENST00000587762 1774 ntBASIC18.06■□□□□ 0.48
USP50Q70EL3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
USP50Q70EL3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
USP50Q70EL3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.06■□□□□ 0.48
USP50Q70EL3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.05■□□□□ 0.48
USP50Q70EL3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.05■□□□□ 0.48
USP50Q70EL3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP50Q70EL3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms