Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AC097493.3-201ENST00000509725 367 ntBASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AL512361.1-201ENST00000554200 418 ntBASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.09□□□□□ -0.15
NHLRC1Q6VVB1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NHLRC1Q6VVB1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NHLRC1Q6VVB1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.08□□□□□ -0.15
NHLRC1Q6VVB1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
NHLRC1Q6VVB1 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 AC010336.2-201ENST00000564226 506 ntBASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 MIR6069-201ENST00000620069 79 ntBASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 AC106881.1-201ENST00000605849 3329 ntBASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NHLRC1Q6VVB1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms