Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 ACTG1P4-201ENST00000425123 1122 ntBASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 FAM185BP-201ENST00000443595 716 ntBASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 AC239800.4-201ENST00000603712 296 ntBASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXR1Q6PIV2 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
FOXR1Q6PIV2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 MIR648-201ENST00000385046 94 ntBASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 PAWRP1-201ENST00000451083 565 ntBASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 AC005498.2-205ENST00000593218 784 ntBASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 AC027612.1-201ENST00000445234 2395 ntBASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FOXR1Q6PIV2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXR1Q6PIV2 AC105250.1-201ENST00000509378 2057 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms