Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 AC099063.4-201ENST00000641099 1602 ntBASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 DFFBP1-201ENST00000433250 979 ntBASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 RPL13P2-201ENST00000440687 659 ntBASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TTC39BQ5VTQ0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SPDYE18-201ENST00000510091 1050 ntBASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SLED1-202ENST00000512051 380 ntBASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 AC097359.3-201ENST00000603982 1210 ntBASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 AC006486.2-201ENST00000624246 2199 ntBASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TTC39BQ5VTQ0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TTC39BQ5VTQ0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms