Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 AC008761.3-201ENST00000624803 892 ntBASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CFAP221Q4G0U5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CFAP221Q4G0U5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 SERBP1P3-201ENST00000459980 809 ntBASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 TERF1P3-201ENST00000505638 1227 ntBASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 AC009407.1-201ENST00000568958 598 ntBASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 AC138761.1-201ENST00000584393 385 ntBASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 AC011477.6-201ENST00000604980 1927 ntBASIC17.08■□□□□ 0.32
CFAP221Q4G0U5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CFAP221Q4G0U5 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms