Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.6□□□□□ -0.07
CD47Q08722 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.6□□□□□ -0.07
CD47Q08722 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.6□□□□□ -0.07
CD47Q08722 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
CD47Q08722 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.6□□□□□ -0.07
CD47Q08722 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
CD47Q08722 AC140113.2-201ENST00000604370 208 ntBASIC14.6□□□□□ -0.07
CD47Q08722 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 ZBED1P1-201ENST00000502364 1930 ntBASIC14.6□□□□□ -0.07
CD47Q08722 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.6□□□□□ -0.07
CD47Q08722 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD47Q08722 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CD47Q08722 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 AC127383.1-201ENST00000444697 1800 ntBASIC14.59□□□□□ -0.07
CD47Q08722 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.59□□□□□ -0.07
CD47Q08722 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.59□□□□□ -0.07
CD47Q08722 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CD47Q08722 AC006504.5-208ENST00000588784 2401 ntBASIC14.59□□□□□ -0.07
CD47Q08722 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 KRT18P3-201ENST00000451602 1288 ntBASIC14.59□□□□□ -0.07
CD47Q08722 PDPK2P-202ENST00000562415 1191 ntBASIC14.59□□□□□ -0.07
CD47Q08722 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.59□□□□□ -0.07
CD47Q08722 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.59□□□□□ -0.07
CD47Q08722 AL365330.1-201ENST00000607459 531 ntBASIC14.59□□□□□ -0.07
CD47Q08722 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 CICP14-201ENST00000629111 2732 ntBASIC14.59□□□□□ -0.07
CD47Q08722 MYO15B-237ENST00000642007 4893 ntBASIC14.59□□□□□ -0.07
CD47Q08722 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.59□□□□□ -0.07
CD47Q08722 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD47Q08722 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD47Q08722 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD47Q08722 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
CD47Q08722 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.58□□□□□ -0.07
CD47Q08722 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CD47Q08722 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
CD47Q08722 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD47Q08722 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CD47Q08722 LINC01230-201ENST00000625222 3017 ntBASIC14.58□□□□□ -0.07
CD47Q08722 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.58□□□□□ -0.07
CD47Q08722 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD47Q08722 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.58□□□□□ -0.08
CD47Q08722 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD47Q08722 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD47Q08722 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.58□□□□□ -0.08
CD47Q08722 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.58□□□□□ -0.08
CD47Q08722 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CD47Q08722 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD47Q08722 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD47Q08722 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD47Q08722 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.58□□□□□ -0.08
CD47Q08722 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD47Q08722 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
CD47Q08722 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms