Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC087481.3-201ENST00000602886 1894 ntBASIC14.33□□□□□ -0.12
LTBQ06643 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 AC006058.4-201ENST00000624016 1670 ntBASIC14.33□□□□□ -0.12
LTBQ06643 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LTBQ06643 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.33□□□□□ -0.12
LTBQ06643 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTBQ06643 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LTBQ06643 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBQ06643 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBQ06643 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBQ06643 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBQ06643 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBQ06643 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBQ06643 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.32□□□□□ -0.12
LTBQ06643 AL596325.1-201ENST00000563991 1082 ntBASIC14.32□□□□□ -0.12
LTBQ06643 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 AC084346.2-201ENST00000607097 949 ntBASIC14.32□□□□□ -0.12
LTBQ06643 AC007967.4-201ENST00000614700 386 ntBASIC14.32□□□□□ -0.12
LTBQ06643 AP001059.3-201ENST00000619053 235 ntBASIC14.32□□□□□ -0.12
LTBQ06643 AL390754.1-201ENST00000619088 582 ntBASIC14.32□□□□□ -0.12
LTBQ06643 AC025048.6-201ENST00000634326 1161 ntBASIC14.32□□□□□ -0.12
LTBQ06643 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.32□□□□□ -0.12
LTBQ06643 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LTBQ06643 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTBQ06643 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.32□□□□□ -0.12
LTBQ06643 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LTBQ06643 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
LTBQ06643 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBQ06643 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LTBQ06643 AL607033.1-201ENST00000623900 1599 ntBASIC14.31□□□□□ -0.12
LTBQ06643 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBQ06643 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LTBQ06643 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 AC125807.1-201ENST00000483097 614 ntBASIC14.31□□□□□ -0.12
LTBQ06643 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBQ06643 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.31□□□□□ -0.12
LTBQ06643 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.31□□□□□ -0.12
LTBQ06643 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LTBQ06643 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.31□□□□□ -0.12
LTBQ06643 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 AC127383.1-201ENST00000444697 1800 ntBASIC14.31□□□□□ -0.12
LTBQ06643 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBQ06643 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
LTBQ06643 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.31□□□□□ -0.12
LTBQ06643 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LTBQ06643 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LTBQ06643 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.3□□□□□ -0.12
LTBQ06643 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LTBQ06643 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms