Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.61□□□□□ -0.23
UBA52P62987 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.61□□□□□ -0.23
UBA52P62987 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.61□□□□□ -0.23
UBA52P62987 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBA52P62987 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.61□□□□□ -0.23
UBA52P62987 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
UBA52P62987 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBA52P62987 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
UBA52P62987 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.6□□□□□ -0.23
UBA52P62987 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.6□□□□□ -0.23
UBA52P62987 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UBA52P62987 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 AC005912.2-201ENST00000619492 2400 ntBASIC13.6□□□□□ -0.23
UBA52P62987 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 LINC00552-201ENST00000625151 2579 ntBASIC13.6□□□□□ -0.23
UBA52P62987 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.6□□□□□ -0.23
UBA52P62987 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 AC069335.1-201ENST00000489972 472 ntBASIC13.6□□□□□ -0.23
UBA52P62987 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
UBA52P62987 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.6□□□□□ -0.23
UBA52P62987 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.6□□□□□ -0.23
UBA52P62987 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 AC005252.3-201ENST00000623855 2258 ntBASIC13.6□□□□□ -0.23
UBA52P62987 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBA52P62987 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
UBA52P62987 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
UBA52P62987 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
UBA52P62987 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.59□□□□□ -0.23
UBA52P62987 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.59□□□□□ -0.23
UBA52P62987 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UBA52P62987 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms