Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 MIR346-201ENST00000362234 95 ntBASIC14.64□□□□□ -0.07
CDH12P55289 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 MIR574-201ENST00000385209 96 ntBASIC14.64□□□□□ -0.07
CDH12P55289 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 YBX2P1-201ENST00000394192 760 ntBASIC14.64□□□□□ -0.07
CDH12P55289 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 AC079140.1-201ENST00000508039 487 ntBASIC14.64□□□□□ -0.07
CDH12P55289 POLD2P1-201ENST00000511220 997 ntBASIC14.64□□□□□ -0.07
CDH12P55289 PGAM5P1-201ENST00000518923 814 ntBASIC14.64□□□□□ -0.07
CDH12P55289 KRT18P58-201ENST00000527480 1120 ntBASIC14.64□□□□□ -0.07
CDH12P55289 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH12P55289 LINC01225-203ENST00000563550 1244 ntBASIC14.64□□□□□ -0.07
CDH12P55289 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.64□□□□□ -0.07
CDH12P55289 AP000842.3-202ENST00000569238 1080 ntBASIC14.64□□□□□ -0.07
CDH12P55289 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.64□□□□□ -0.07
CDH12P55289 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
CDH12P55289 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 FAM220BP-201ENST00000377689 816 ntBASIC14.63□□□□□ -0.07
CDH12P55289 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH12P55289 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH12P55289 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH12P55289 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.63□□□□□ -0.07
CDH12P55289 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.63□□□□□ -0.07
CDH12P55289 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH12P55289 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 C20orf181-201ENST00000623918 480 ntBASIC14.63□□□□□ -0.07
CDH12P55289 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH12P55289 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH12P55289 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CDH12P55289 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.63□□□□□ -0.07
CDH12P55289 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.63□□□□□ -0.07
CDH12P55289 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH12P55289 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH12P55289 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH12P55289 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDH12P55289 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH12P55289 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH12P55289 AL022342.1-201ENST00000400363 863 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms