Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ATP1B3P54709 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATP1B3P54709 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ATP1B3P54709 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ATP1B3P54709 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.64□□□□□ -0.23
ATP1B3P54709 ADH5P3-201ENST00000433842 1137 ntBASIC13.64□□□□□ -0.23
ATP1B3P54709 MKNK2P1-201ENST00000437526 628 ntBASIC13.64□□□□□ -0.23
ATP1B3P54709 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.64□□□□□ -0.23
ATP1B3P54709 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 KRT8P48-201ENST00000515599 1220 ntBASIC13.64□□□□□ -0.23
ATP1B3P54709 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.64□□□□□ -0.23
ATP1B3P54709 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.64□□□□□ -0.23
ATP1B3P54709 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AL450472.2-201ENST00000603663 1156 ntBASIC13.64□□□□□ -0.23
ATP1B3P54709 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC090616.6-203ENST00000579186 1945 ntBASIC13.64□□□□□ -0.23
ATP1B3P54709 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.64□□□□□ -0.23
ATP1B3P54709 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.64□□□□□ -0.23
ATP1B3P54709 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 KRT8P37-201ENST00000451609 1420 ntBASIC13.64□□□□□ -0.23
ATP1B3P54709 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.64□□□□□ -0.23
ATP1B3P54709 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATP1B3P54709 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 CICP23-201ENST00000605013 2741 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.63□□□□□ -0.23
ATP1B3P54709 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 AC067750.1-201ENST00000608826 6545 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATP1B3P54709 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ATP1B3P54709 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 AC004832.2-201ENST00000426397 482 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.63□□□□□ -0.23
ATP1B3P54709 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.63□□□□□ -0.23
ATP1B3P54709 AL592309.1-201ENST00000443127 649 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 PHKG1P2-201ENST00000457537 863 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ATP1B3P54709 LINC01225-203ENST00000563550 1244 ntBASIC13.63□□□□□ -0.23
ATP1B3P54709 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms