Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.09■□□□□ 0.33
CLCN3P51790 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.09■□□□□ 0.33
CLCN3P51790 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CLCN3P51790 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 AC084364.1-201ENST00000551967 1556 ntBASIC17.09■□□□□ 0.33
CLCN3P51790 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.09■□□□□ 0.33
CLCN3P51790 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLCN3P51790 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.09■□□□□ 0.33
CLCN3P51790 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN3P51790 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CLCN3P51790 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN3P51790 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN3P51790 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.08■□□□□ 0.33
CLCN3P51790 AP005117.1-202ENST00000581724 1908 ntBASIC17.08■□□□□ 0.33
CLCN3P51790 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CLCN3P51790 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.08■□□□□ 0.33
CLCN3P51790 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.08■□□□□ 0.33
CLCN3P51790 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN3P51790 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN3P51790 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN3P51790 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN3P51790 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 RPL7P3-201ENST00000441388 714 ntBASIC17.08■□□□□ 0.32
CLCN3P51790 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.08■□□□□ 0.32
CLCN3P51790 BX539320.1-201ENST00000623759 877 ntBASIC17.08■□□□□ 0.32
CLCN3P51790 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN3P51790 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.08■□□□□ 0.32
CLCN3P51790 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CLCN3P51790 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CLCN3P51790 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.08■□□□□ 0.32
CLCN3P51790 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CLCN3P51790 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
CLCN3P51790 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN3P51790 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CLCN3P51790 AC016694.1-201ENST00000434179 700 ntBASIC17.07■□□□□ 0.32
CLCN3P51790 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCN3P51790 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
CLCN3P51790 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.07■□□□□ 0.32
CLCN3P51790 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCN3P51790 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCN3P51790 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN3P51790 AP005019.2-201ENST00000615104 511 ntBASIC17.07■□□□□ 0.32
CLCN3P51790 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLCN3P51790 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCN3P51790 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLCN3P51790 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCN3P51790 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCN3P51790 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCN3P51790 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCN3P51790 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLCN3P51790 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN3P51790 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN3P51790 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN3P51790 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCN3P51790 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN3P51790 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCN3P51790 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.06■□□□□ 0.32
CLCN3P51790 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCN3P51790 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.06■□□□□ 0.32
CLCN3P51790 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms