Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PHKG1P2-201ENST00000457537 863 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 HNRNPUP1-201ENST00000554987 333 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 AL079307.3-201ENST00000556114 283 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF144AP50876 AC010326.4-201ENST00000604665 891 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 AC106028.4-201ENST00000614509 607 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
RNF144AP50876 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF144AP50876 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 AC007326.2-201ENST00000624224 7579 ntBASIC14.61□□□□□ -0.07
RNF144AP50876 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RNF144AP50876 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.61□□□□□ -0.07
RNF144AP50876 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RNF144AP50876 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 FAM45BP-202ENST00000592932 1624 ntBASIC14.6□□□□□ -0.07
RNF144AP50876 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.6□□□□□ -0.07
RNF144AP50876 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RNF144AP50876 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 RPL37AP1-201ENST00000412502 279 ntBASIC14.6□□□□□ -0.07
RNF144AP50876 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
RNF144AP50876 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 AC138035.3-201ENST00000622706 2791 ntBASIC14.6□□□□□ -0.07
RNF144AP50876 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RNF144AP50876 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
RNF144AP50876 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RNF144AP50876 AC127383.1-201ENST00000444697 1800 ntBASIC14.59□□□□□ -0.07
RNF144AP50876 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.59□□□□□ -0.07
RNF144AP50876 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RNF144AP50876 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.59□□□□□ -0.07
RNF144AP50876 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RNF144AP50876 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms