Protein–RNA interactions for Protein: P40199

CEACAM6, Carcinoembryonic antigen-related cell adhesion molecule 6, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM6P40199 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM6P40199 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM6P40199 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM6P40199 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.13□□□□□ -0.31
CEACAM6P40199 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
CEACAM6P40199 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.13□□□□□ -0.31
CEACAM6P40199 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CEACAM6P40199 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CEACAM6P40199 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 AC023908.3-201ENST00000564211 3047 ntBASIC13.12□□□□□ -0.31
CEACAM6P40199 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM6P40199 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 YBX2P1-201ENST00000394192 760 ntBASIC13.12□□□□□ -0.31
CEACAM6P40199 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 MCCD1P2-201ENST00000423228 335 ntBASIC13.12□□□□□ -0.31
CEACAM6P40199 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.12□□□□□ -0.31
CEACAM6P40199 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM6P40199 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.12□□□□□ -0.31
CEACAM6P40199 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM6P40199 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM6P40199 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM6P40199 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.12□□□□□ -0.31
CEACAM6P40199 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
CEACAM6P40199 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM6P40199 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM6P40199 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM6P40199 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM6P40199 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM6P40199 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 AP3S2-216ENST00000617003 1561 ntBASIC13.11□□□□□ -0.31
CEACAM6P40199 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM6P40199 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CEACAM6P40199 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM6P40199 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM6P40199 AC005089.1-201ENST00000619486 2241 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms