Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.82□□□□□ -0.36
CEACAM3P40198 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.82□□□□□ -0.36
CEACAM3P40198 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CEACAM3P40198 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 AC023824.1-201ENST00000562945 2975 ntBASIC12.82□□□□□ -0.36
CEACAM3P40198 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CEACAM3P40198 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.82□□□□□ -0.36
CEACAM3P40198 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.82□□□□□ -0.36
CEACAM3P40198 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CEACAM3P40198 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.82□□□□□ -0.36
CEACAM3P40198 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 AC067750.1-201ENST00000608826 6545 ntBASIC12.81□□□□□ -0.36
CEACAM3P40198 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.81□□□□□ -0.36
CEACAM3P40198 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.81□□□□□ -0.36
CEACAM3P40198 TARDBPP1-201ENST00000442013 1203 ntBASIC12.81□□□□□ -0.36
CEACAM3P40198 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.81□□□□□ -0.36
CEACAM3P40198 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.81□□□□□ -0.36
CEACAM3P40198 SLED1-202ENST00000512051 380 ntBASIC12.81□□□□□ -0.36
CEACAM3P40198 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.81□□□□□ -0.36
CEACAM3P40198 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 AL844908.2-201ENST00000609461 460 ntBASIC12.81□□□□□ -0.36
CEACAM3P40198 AL109936.8-201ENST00000641772 604 ntBASIC12.81□□□□□ -0.36
CEACAM3P40198 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CEACAM3P40198 AC018892.3-201ENST00000623986 2499 ntBASIC12.81□□□□□ -0.36
CEACAM3P40198 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CEACAM3P40198 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.81□□□□□ -0.36
CEACAM3P40198 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CEACAM3P40198 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 AL122018.1-201ENST00000446607 2310 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CEACAM3P40198 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CEACAM3P40198 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.8□□□□□ -0.36
CEACAM3P40198 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.8□□□□□ -0.36
CEACAM3P40198 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CEACAM3P40198 TSSK5P-201ENST00000423978 907 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms