Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.55■■□□□ 1.04
CPS1P31327 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.55■■□□□ 1.04
CPS1P31327 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 AC005632.3-201ENST00000605544 308 ntBASIC21.55■■□□□ 1.04
CPS1P31327 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPS1P31327 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.54■■□□□ 1.04
CPS1P31327 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 RN7SL258P-201ENST00000478664 300 ntBASIC21.54■■□□□ 1.04
CPS1P31327 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC21.54■■□□□ 1.04
CPS1P31327 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC21.54■■□□□ 1.04
CPS1P31327 C2orf69P1-201ENST00000563532 1093 ntBASIC21.54■■□□□ 1.04
CPS1P31327 SNORD3B-2-202ENST00000571722 791 ntBASIC21.54■■□□□ 1.04
CPS1P31327 ETV2-207ENST00000619399 994 ntTSL 5 BASIC21.54■■□□□ 1.04
CPS1P31327 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CPS1P31327 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPS1P31327 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.53■■□□□ 1.04
CPS1P31327 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 MIR3677-201ENST00000578964 60 ntBASIC21.53■■□□□ 1.04
CPS1P31327 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.53■■□□□ 1.04
CPS1P31327 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
CPS1P31327 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPS1P31327 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC21.53■■□□□ 1.04
CPS1P31327 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC21.52■■□□□ 1.04
CPS1P31327 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CPS1P31327 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC21.52■■□□□ 1.04
CPS1P31327 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 CAP2P1-201ENST00000557743 1390 ntBASIC21.52■■□□□ 1.04
CPS1P31327 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 OR2K2-202ENST00000374428 1038 ntBASIC21.52■■□□□ 1.04
CPS1P31327 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CPS1P31327 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC21.52■■□□□ 1.04
CPS1P31327 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC21.52■■□□□ 1.04
CPS1P31327 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC21.52■■□□□ 1.04
CPS1P31327 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC21.52■■□□□ 1.04
CPS1P31327 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 PFN2-205ENST00000461868 613 ntTSL 2 BASIC21.52■■□□□ 1.04
CPS1P31327 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC21.52■■□□□ 1.04
CPS1P31327 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC21.52■■□□□ 1.04
CPS1P31327 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.52■■□□□ 1.04
CPS1P31327 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC21.52■■□□□ 1.04
CPS1P31327 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC21.52■■□□□ 1.04
CPS1P31327 AC105137.3-201ENST00000617588 984 ntBASIC21.52■■□□□ 1.04
CPS1P31327 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CPS1P31327 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CPS1P31327 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPS1P31327 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.52■■□□□ 1.04
CPS1P31327 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CPS1P31327 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CPS1P31327 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CPS1P31327 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPS1P31327 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC21.51■■□□□ 1.03
CPS1P31327 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CPS1P31327 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms