Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TM4SF1P30408 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF1P30408 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF1P30408 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 PDIA3P2-201ENST00000428073 158 ntBASIC19.06■□□□□ 0.64
TM4SF1P30408 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF1P30408 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TM4SF1P30408 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 SNORD3B-2-202ENST00000571722 791 ntBASIC19.06■□□□□ 0.64
TM4SF1P30408 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.06■□□□□ 0.64
TM4SF1P30408 AC112504.1-201ENST00000623415 1841 ntBASIC19.06■□□□□ 0.64
TM4SF1P30408 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.06■□□□□ 0.64
TM4SF1P30408 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM4SF1P30408 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 PCDHA14-201ENST00000506751 2298 ntBASIC19.05■□□□□ 0.64
TM4SF1P30408 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TM4SF1P30408 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.05■□□□□ 0.64
TM4SF1P30408 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 LINC02447-202ENST00000501888 2146 ntBASIC19.05■□□□□ 0.64
TM4SF1P30408 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 AL160314.3-201ENST00000556041 767 ntBASIC19.05■□□□□ 0.64
TM4SF1P30408 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.05■□□□□ 0.64
TM4SF1P30408 AC090164.2-201ENST00000611487 516 ntBASIC19.05■□□□□ 0.64
TM4SF1P30408 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 AC006453.1-201ENST00000636037 1257 ntBASIC19.05■□□□□ 0.64
TM4SF1P30408 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
TM4SF1P30408 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM4SF1P30408 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.05■□□□□ 0.64
TM4SF1P30408 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TM4SF1P30408 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TM4SF1P30408 FKBP4P6-201ENST00000457486 1332 ntBASIC19.04■□□□□ 0.64
TM4SF1P30408 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TM4SF1P30408 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF1P30408 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF1P30408 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.04■□□□□ 0.64
TM4SF1P30408 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC19.04■□□□□ 0.64
TM4SF1P30408 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.04■□□□□ 0.64
TM4SF1P30408 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.04■□□□□ 0.64
TM4SF1P30408 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.04■□□□□ 0.64
TM4SF1P30408 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
TM4SF1P30408 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM4SF1P30408 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.04■□□□□ 0.64
TM4SF1P30408 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TM4SF1P30408 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms